STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107082617Potassium large conductance calcium-activated channel, subfamily M, beta member 2. (236 aa)    
Predicted Functional Partners:
LOC107092828
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
    
 0.952
ENSCVAP00000007079
Uncharacterized protein.
     
0.917
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
0.913
PRKG1
Protein kinase cGMP-dependent 1.
     
  0.905
kcnmb2
Si:ch211-247n2.1.
  
  
 
0.901
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
LOC107090031
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
     
  0.650
LOC107093417
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
  0.650
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
LOC107089490
Potassium calcium-activated channel subfamily M alpha 1.
    
 0.547
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.