STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)    
Predicted Functional Partners:
cav2
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
  
0.980
LOC107096191
Tyrosine-protein kinase.
   
 0.924
fyn
Tyrosine-protein kinase.
   
 0.924
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.741
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
 0.740
ENSCVAP00000003761
Integrin beta; Belongs to the integrin beta chain family.
     
 0.725
LOC107084752
Integrin beta; Belongs to the integrin beta chain family.
     
 0.725
itgb3
Integrin beta; Belongs to the integrin beta chain family.
     
 0.725
itgb4
Integrin beta.
     
 0.702
itgb6
Integrin beta; Belongs to the integrin beta chain family.
     
 0.700
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.