STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007225Calcium/calmodulin-dependent protein kinase kinase 1, alpha a. (431 aa)    
Predicted Functional Partners:
pacc1
Proton activated chloride channel 1.
      
 0.672
nenf
Uncharacterized protein.
   
  
 0.671
LOC107087113
La ribonucleoprotein domain family, member 1B.
      
 0.643
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.618
LOC107084023
Calmodulin.
    
 0.618
LOC107094827
Calmodulin.
    
 0.618
LOC107094180
Calmodulin.
    
 0.618
jade1
Jade family PHD finger 1.
   
  
 0.557
LOC107087107
Acetylserotonin O-methyltransferase 2.
      
 0.503
LOC107101406
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.469
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.