STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100138Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family. (309 aa)    
Predicted Functional Partners:
adck1
AarF domain containing kinase 1.
  
  
 0.596
b3gntl1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1.
      
 0.557
wdr18
WD repeat domain 18.
      
 0.499
tbcd
Tubulin folding cofactor D.
 
  
 0.498
ctxn1
Cortexin 1.
      
 0.475
vat1l
Vesicle amine transport 1-like.
  
  
 0.463
gpsm2
Uncharacterized protein.
      
 0.463
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
      
 0.455
gpatch11
G patch domain containing 11.
      
 0.414
adck5
AarF domain containing kinase 5.
  
  
 0.411
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.