STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107096705Uncharacterized protein. (602 aa)    
Predicted Functional Partners:
Lrrc34
Uncharacterized protein.
    
 
 0.629
LYPD6
LY6/PLAUR domain containing 6.
    
 
 0.602
ENSCVAP00000025630
Uncharacterized protein.
  
  
  0.486
LOC107097035
Uncharacterized protein.
  
 
  0.483
egfl6
EGF-like-domain, multiple 6.
    
 0.449
LOC107094568
Tetratricopeptide repeat domain 9.
    
 
 0.434
GPRC5D
G protein-coupled receptor class C group 5 member D.
  
  
  0.426
ENSCVAP00000017568
Uncharacterized protein.
  
     0.422
LOC107087703
Uncharacterized protein.
  
 
  0.417
LOC107084080
Pre-B-cell leukemia homeobox interacting protein 1a.
  
     0.414
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.