STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r16bProtein phosphatase 1, regulatory subunit 16B. (552 aa)    
Predicted Functional Partners:
LOC107082804
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.755
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.755
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.735
LOC107094299
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.735
LOC107096949
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.735
dhx35
DEAH-box helicase 35.
   
 0.618
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
    
 0.571
rwdd1
RWD domain containing 1.
      
 0.551
rnf24
Ring finger protein 24.
      
 0.539
LOC107092270
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
     
 0.507
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.