STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086012G protein-coupled receptor 22b. (438 aa)    
Predicted Functional Partners:
igfbp2
Insulin-like growth factor binding protein 2a.
      
 0.643
slc1a3
Amino acid transporter.
      
 0.631
trim8
Tripartite motif containing 8b.
      
 0.485
kbtbd3
Kelch repeat and BTB (POZ) domain containing 3.
  
  
  0.445
c9orf72
Zgc:100846.
  
     0.430
LOC107081373
G protein-coupled receptor 20; Belongs to the G-protein coupled receptor 1 family.
     
 0.403
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.