STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007305Ankyrin repeat, SAM and basic leucine zipper domain containing 1. (411 aa)    
Predicted Functional Partners:
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.773
fkbp6
Peptidylprolyl isomerase.
   
 0.739
tdrd1
Tudor domain containing 1.
   
 0.736
Ct55
Uncharacterized protein.
   
 0.732
tdrd9
Tudor domain containing 9.
    
 0.703
ENSCVAP00000003059
Tudor domain containing 12.
    
 0.674
pld6
PLD phosphodiesterase domain-containing protein.
   
  
 0.674
LOC107104034
Tudor and KH domain containing.
   
 
 0.643
henmt1
HEN methyltransferase 1.
     
 0.630
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.619
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.