STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kizKizuna centrosomal protein. (727 aa)    
Predicted Functional Partners:
sclt1
Sodium channel and clathrin linker 1.
    
  0.657
mfhas1
Malignant fibrous histiocytoma amplified sequence 1.
    
 0.496
gprin1
GRIN_C domain-containing protein.
  
 
  0.488
shld2
Si:ch211-134m17.9.
      
 0.478
spata7
Uncharacterized protein.
  
     0.477
LOC107082952
Si:dkeyp-97a10.3.
  
 
  0.460
LOC107085652
CLOCK-interacting pacemaker a.
  
     0.428
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.405
LOC107089193
Uncharacterized protein.
  
 
  0.404
LOC107082106
NAC-A/B domain-containing protein.
  
 
  0.401
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.