STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007360ACB domain-containing protein. (97 aa)    
Predicted Functional Partners:
pex14
Peroxisomal biogenesis factor 14.
   
 0.635
pex16
Peroxisomal membrane protein PEX16.
   
 0.594
pex13
Peroxisomal biogenesis factor 13.
   
 0.581
pex3
Peroxisomal biogenesis factor 3.
    
 0.580
pex19
Peroxisomal biogenesis factor 19.
     
 0.568
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.563
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.547
gdap1
Ganglioside induced differentiation associated protein 1.
     
 0.539
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.532
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.527
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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