STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007440Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
LOC107102986
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.959
LOC107096024
Proopiomelanocortin.
    
 
 0.819
ENSCVAP00000001388
Uncharacterized protein.
    
 
 0.793
LOC107083380
Uncharacterized protein.
    
 
 0.736
ENSCVAP00000003353
Melanocortin 4 receptor.
    
 
 0.620
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
   0.501
LOC107089973
Melanocortin 5b receptor.
    
 
 0.497
DIAPH1
Diaphanous related formin 1.
      
 0.454
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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