STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107083767Zgc:153615. (245 aa)    
Predicted Functional Partners:
LOC107101783
Uncharacterized protein.
   
  
 0.676
LOC107088342
WASP like actin nucleation promoting factor b.
      
 0.672
LOC107082621
Eph receptor B3a.
      
 0.672
LOC107088336
G_PROTEIN_RECEP_F3_4 domain-containing protein.
      
 0.672
ENSCVAP00000025123
Glutamate receptor, metabotropic 8b.
      
 0.672
cpe
Carboxypeptidase E.
   
  
 0.665
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
      
 0.497
LOC107085337
Pleiotrophin.
      
 0.485
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.