STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007549Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
ENSCVAP00000000544
Uncharacterized protein.
  
     0.541
LOC107104305
C1q and TNF related 7.
  
     0.533
c1qtnf2
C1q and TNF related 2.
  
     0.528
LOC107103383
C1q domain-containing protein.
  
  0.498
colec11
Collectin sub-family member 11.
  
 
  0.476
LOC107101759
Collagen, type XXVIII, alpha 1b.
  
 
  0.472
COL28A1
Collagen type XXVIII alpha 1 chain.
  
 
  0.459
LOC107101792
LAM_G_DOMAIN domain-containing protein.
  
 
  0.451
scara5
Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways.
  
 
  0.442
COLEC12
Collectin subfamily member 12.
  
 
  0.428
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.