STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbln7Fibulin 7. (444 aa)    
Predicted Functional Partners:
LOC107097122
Zinc finger CCCH-type containing 6.
    
 0.605
zc3h4
Zinc finger CCCH-type containing 4.
    
 0.526
ENSCVAP00000003171
Uncharacterized protein.
    
 0.522
tmod4
Tropomodulin 4 (muscle).
    
 
 0.499
MYOZ1
Myozenin 1.
      
 0.497
anapc1
Anaphase promoting complex subunit 1.
     
 0.487
CKM
Creatine kinase, M-type; Belongs to the ATP:guanido phosphotransferase family.
      
 0.463
LOC107092290
Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family.
      
 0.463
bsdc1
BSD domain containing 1.
      
 0.449
amotl2
Angiomotin like 2a.
    
 0.435
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.