STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35b4Solute carrier family 35 member B4. (331 aa)    
Predicted Functional Partners:
coasy
CoA synthase.
      
 0.671
slc35c1
Solute carrier family 35 member C1.
      
 0.663
slc35b2
Solute carrier family 35 member B2.
      
 0.662
chid1
Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family.
      
 0.645
slc35a5
Solute carrier family 35 member A5.
      
 0.582
slc35f6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
      
 0.579
LOC107084677
Si:ch211-248a14.8.
   
  
 0.558
SLC35D1
TPT domain-containing protein.
   
  
 0.529
slc35d1
Solute carrier family 35 member D1a.
   
  
 0.529
SLC35E2A
Solute carrier family 35 member E2A.
      
 0.483
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.