STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd14Potassium channel tetramerization domain containing 14. (241 aa)    
Predicted Functional Partners:
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.493
LOC107090635
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
   
 0.427
kctd10
Potassium channel tetramerization domain containing 10.
     
0.409
LOC107090663
Sprouty related EVH1 domain containing 3.
      
 0.408
TMEM184B
Transmembrane protein 184B.
      
 0.408
tmem184a
Transmembrane protein 184a.
      
 0.408
tfap2e
Transcription factor AP-2 epsilon.
   
 0.408
tfap2b
Transcription factor AP-2 beta.
   
 0.408
tfap2a
Transcription factor AP-2 alpha.
   
 0.408
LOC107096648
Transmembrane protein 184B.
      
 0.408
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.