STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM92BFamily with sequence similarity 92 member B. (163 aa)    
Predicted Functional Partners:
ranbp2
RAN binding protein 2.
   
 0.587
ND4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
 
 0.532
pibf1
Progesterone immunomodulatory binding factor 1.
   
 0.497
zfand4
Zinc finger, AN1-type domain 4.
    
 0.483
klhl36
Kelch-like family member 36.
      
 0.479
kiaa0513
Zgc:91860.
      
 0.449
LOC107081922
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.437
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.437
psmd9
Uncharacterized protein.
    
 0.437
LOC107082735
Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.
    
 0.424
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (22%) [HD]