STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
invsInversin. (940 aa)    
Predicted Functional Partners:
dvl1
Dishevelled segment polarity protein 1a.
    
 0.930
dvl2
Dishevelled segment polarity protein 2.
    
 0.930
dvl3
Dishevelled segment polarity protein 3a.
    
 0.930
LOC107103935
Uncharacterized protein.
    
 0.930
ift88
Intraflagellar transport 88 homolog.
   
 0.720
nek8
Protein kinase domain-containing protein.
   
 0.717
nphp3
Nephronophthisis 3.
   
 0.699
nphp1
Nephronophthisis 1.
    
 0.686
PRICKLE1
Prickle homolog 1a.
    
 0.680
LOC107105240
Uncharacterized protein.
   
 0.655
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.