STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naaladl2Uncharacterized protein. (665 aa)    
Predicted Functional Partners:
LOC107096550
Erythropoietin receptor.
    
 0.620
FAM155A
Family with sequence similarity 155 member A.
      
 0.597
tmem117
Transmembrane protein 117.
      
 0.585
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
     
 0.527
ENSCVAP00000001543
Katanin p60 subunit A-like 2.
   
 
 0.497
snap29
Synaptosome associated protein 29.
     
 0.484
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
     
 0.483
tmem161b
Transmembrane protein 161B.
      
 0.483
ENSCVAP00000010755
Uncharacterized protein.
     
 0.478
ENSCVAP00000016004
Uncharacterized protein.
     
 0.478
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.