STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gas6Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
mertk
C-mer proto-oncogene tyrosine kinase a.
    
 0.725
AXL
AXL receptor tyrosine kinase.
    
 0.725
tyro3
TYRO3 protein tyrosine kinase.
    
 0.699
tnfrsf11a
Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.
      
 0.665
LOC107095805
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
   
 
  0.619
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
   
 
  0.619
lyve1
Lymphatic vessel endothelial hyaluronic receptor 1a.
    
 0.546
LOC107103378
C1q domain-containing protein.
    
 0.422
LOC107092808
FAM20C golgi associated secretory pathway kinase a.
    
  0.419
LOC107086263
Fam20C domain-containing protein.
    
  0.419
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.