STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
esrraEstrogen-related receptor alpha. (433 aa)    
Predicted Functional Partners:
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
 0.986
LOC107103984
Peroxisome proliferator-activated receptor gamma, coactivator 1 beta.
    
 0.880
nrip1
Nuclear receptor interacting protein 1b.
    
 0.712
nrf1
Nuclear respiratory factor 1.
     
 0.669
LOC107090071
Uncharacterized protein.
    
 
 0.651
ENSCVAP00000002779
GPS2_interact domain-containing protein.
    
 0.635
Ncor1
Uncharacterized protein.
    
 0.635
ncor2
Nuclear receptor corepressor 2.
    
 0.635
LOC107080880
Uncharacterized protein.
    
 0.597
LOC107088355
Cytochrome c oxidase subunit 5B2.
   
 
 0.582
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.