STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plk3Serine/threonine-protein kinase PLK. (667 aa)    
Predicted Functional Partners:
ranbp2
RAN binding protein 2.
   
 0.959
LOC107104443
Intersectin 2b.
    
 0.954
ENSCVAP00000031587
Uncharacterized protein.
    
 0.954
ENSCVAP00000031602
Uncharacterized protein.
    
 0.954
espl1
Extra spindle pole bodies like 1, separase.
   
 0.945
cdc20
Cell division cycle 20 homolog.
   
 0.940
cdc25b
Rhodanese domain-containing protein.
   
 0.902
smc3
Structural maintenance of chromosomes protein.
   
 0.896
incenp
Uncharacterized protein.
   
 0.885
LOC107082631
Fizzy/cell division cycle 20 related 1b.
   
 0.871
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.