STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107082582Si:dkey-175m17.7. (879 aa)    
Predicted Functional Partners:
mapk8
Mitogen-activated protein kinase.
   
 0.653
LOC107101533
Mitogen-activated protein kinase.
   
 0.653
mapk10
Mitogen-activated protein kinase.
   
 0.653
LOC107102050
Mitogen-activated protein kinase.
   
 0.653
LOC107086723
Mitogen-activated protein kinase.
   
 0.619
LOC107101432
Mitogen-activated protein kinase.
   
 0.619
LOC107087504
Mitogen-activated protein kinase.
   
 0.619
LOC107101279
Mitogen-activated protein kinase 11.
   
 0.619
LOC107101278
Mitogen-activated protein kinase 12b.
   
 0.619
LOC107088576
Mitogen-activated protein kinase.
   
 0.619
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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