STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opa3Outer mitochondrial membrane lipid metabolism regulator OPA3. (156 aa)    
Predicted Functional Partners:
ACTA2
Actin alpha 2, smooth muscle.
      
 0.672
rpp14
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
    0.588
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
      
 0.481
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.480
ENSCVAP00000018433
Transmembrane protein 126A.
      
 0.479
ENSCVAP00000031992
annotation not available
      
 0.479
sfxn4
Sideroflexin 4.
      
 0.408
ENSCVAP00000001543
Katanin p60 subunit A-like 2.
   
  
 0.406
mocs1
Molybdenum cofactor synthesis 1.
      
 0.404
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
      
 0.404
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.