STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpm2Zinc finger protein, FOG family member 2a. (1165 aa)    
Predicted Functional Partners:
gata6
GATA binding protein 6.
    
 0.758
gata4
GATA binding protein 4.
    
 0.758
LOC107104570
GATA binding protein 5.
    
 0.758
LOC107100171
GATA binding protein 1a.
    
 0.686
gata1
Uncharacterized protein.
    
 0.686
GATA2
GATA binding protein 2.
    
 0.552
LOC107091504
GATA binding protein 2a.
    
 0.543
gata3
GATA binding protein 3.
    
 0.543
LOC107094466
Estrogen-related receptor gamma b.
    
 0.525
LOC107086944
Estrogen-related receptor gamma a.
    
 0.522
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.