STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx58DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
  
0.981
ENSCVAP00000017002
USP domain-containing protein.
   
 
 0.943
fancg
FA complementation group G.
    
 0.860
fancl
FA complementation group L.
    
 0.858
fancf
FA complementation group F.
    
 0.853
fancb
FA complementation group B.
   
 0.850
ENSCVAP00000026260
FA complementation group C.
    
 0.844
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.782
ercc1
Excision repair cross-complementation group 1.
    
 0.772
faap24
FA core complex associated protein 24.
    
 0.772
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.