STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prex2Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2. (1104 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.727
LOC107085118
Uncharacterized protein.
    
 0.727
LOC107082256
Uncharacterized protein.
    
 0.656
LOC107086129
Uncharacterized protein.
    
 0.656
LOC107082942
Ras homolog family member Gb.
    
 0.573
LOC107089030
Uncharacterized protein.
    
 0.573
ENSCVAP00000018233
Ras homolog gene family, member Gd.
    
 0.573
Rhoh
Ras homolog family member H.
    
 0.565
rhoq
Ras homolog family member Q.
    
 0.565
PTEN
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
     
 0.558
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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