Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
galnt1Polypeptide N-acetylgalactosaminyltransferase. (557 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.801
LOC107087256
Uncharacterized protein.
     
 0.741
LOC107086750
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.734
LOC107082129
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
     
 0.734
LOC107089181
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.706
LOC107089188
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.706
LOC107088933
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.706
C1galt1
Si:dkey-202e17.1.
     
 0.692
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.597
GALNT5
Polypeptide N-acetylgalactosaminyltransferase.
    
   0.589
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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