STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007898Leucine-rich repeats and calponin homology (CH) domain containing 1. (258 aa)    
Predicted Functional Partners:
Lrch3
Calponin-homology (CH) domain-containing protein.
 
      0.806
ENSCVAP00000024400
annotation not available
 
      0.806
ENSCVAP00000016976
Calponin-homology (CH) domain-containing protein.
 
      0.771
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
LOC107101486
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
LOC107090026
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
adgrl1
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
LOC107095380
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.578
LOC107097894
LRRNT domain-containing protein.
  
     0.527
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.