STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnh4Potassium voltage-gated channel, subfamily H (eag-related), member 4b. (877 aa)    
Predicted Functional Partners:
atp1a3
Sodium/potassium-transporting ATPase subunit alpha.
      
 0.625
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.466
LOC107087536
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
    
 0.466
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.466
ENSCVAP00000029359
Aldo_ket_red domain-containing protein.
    
 0.466
ENSCVAP00000031284
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
    
 0.466
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.