STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107088725Coenzyme Q10A. (249 aa)    
Predicted Functional Partners:
LOC107094493
Coenzyme Q8B.
    
 
 0.512
LOC107088355
Cytochrome c oxidase subunit 5B2.
    
 
 0.503
LOC107091756
SCO cytochrome c oxidase assembly protein 1.
   
  
 0.502
LOC107086291
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.497
SLC25A5
Solute carrier family 25 member 5; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.497
LOC107102475
Cytochrome c oxidase subunit 4I2.
      
 0.497
LOC107104003
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.495
ndufaf3
NADH:ubiquinone oxidoreductase complex assembly factor.
      
 0.493
LOC107087943
Ubiquinol-cytochrome c reductase complex assembly factor 1.
      
 0.493
SDHAF4
Succinate dehydrogenase complex assembly factor 4.
      
 0.493
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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