STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000007993Porphobil_deam domain-containing protein. (64 aa)    
Predicted Functional Partners:
uros
Uroporphyrinogen III synthase.
  
 0.992
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 0.985
spata20
Spermatogenesis associated 20.
    
  0.860
urod
Uroporphyrinogen decarboxylase.
  
 0.853
ENDOV
Endonuclease V.
  
 0.805
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.702
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.694
Suox
Sulfite oxidase.
     
 0.664
ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.638
cpox
Coproporphyrinogen oxidase.
  
  
 0.638
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.