STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igsf8Immunoglobulin superfamily, member 8. (602 aa)    
Predicted Functional Partners:
tspan8
CD9 molecule b; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.756
LOC107102394
Tetraspanin.
    
 
 0.756
LOC107093199
Ornithine decarboxylase antizyme 2a.
      
 0.569
ENSCVAP00000031120
CD82 molecule b; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.537
LOC107101972
Tetraspanin.
    
 
 0.512
cd81
Tetraspanin.
    
 
 0.512
acbd6
Acyl-CoA binding domain containing 6.
      
 0.489
LOC107105106
Tetraspanin 3a; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.456
tspan3
Tetraspanin.
    
 
 0.456
LOC107099905
Tetraspanin.
    
 
 0.456
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.