LOC107102500 protein (Cyprinodon variegatus)

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second shell of interactors

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Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

LOC107102500

ANK_REP_REGION domain-containing protein. (1213 aa)

Predicted Functional Partners:

LOC107099133

0.542

LOC107092037

0.542

LOC107098535

0.542

RHOB

0.542

LOC107103110

0.542

LOC107087055

0.542

LOC107100393

0.542

LOC107099242

0.541

LOC107104443

0.508

ENSCVAP00000031602

0.508

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000031602	LOC107087055	ENSCVAP00000031602	ENSCVAP00000025054	Uncharacterized protein.	Uncharacterized protein.	0.833
ENSCVAP00000031602	LOC107092037	ENSCVAP00000031602	ENSCVAP00000010346	Uncharacterized protein.	Uncharacterized protein.	0.833
ENSCVAP00000031602	LOC107098535	ENSCVAP00000031602	ENSCVAP00000020751	Uncharacterized protein.	Ras homolog family member Ca.	0.833
ENSCVAP00000031602	LOC107099133	ENSCVAP00000031602	ENSCVAP00000004119	Uncharacterized protein.	Uncharacterized protein.	0.833
ENSCVAP00000031602	LOC107100393	ENSCVAP00000031602	ENSCVAP00000031568	Uncharacterized protein.	Uncharacterized protein.	0.833
ENSCVAP00000031602	LOC107102500	ENSCVAP00000031602	ENSCVAP00000008024	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.508
ENSCVAP00000031602	LOC107103110	ENSCVAP00000031602	ENSCVAP00000024618	Uncharacterized protein.	Uncharacterized protein.	0.833
ENSCVAP00000031602	LOC107104443	ENSCVAP00000031602	ENSCVAP00000007657	Uncharacterized protein.	Intersectin 2b.	0.905
ENSCVAP00000031602	RHOB	ENSCVAP00000031602	ENSCVAP00000020811	Uncharacterized protein.	Ras homolog family member B.	0.833
LOC107087055	ENSCVAP00000031602	ENSCVAP00000025054	ENSCVAP00000031602	Uncharacterized protein.	Uncharacterized protein.	0.833
LOC107087055	LOC107099242	ENSCVAP00000025054	ENSCVAP00000031949	Uncharacterized protein.	F11 receptor, tandem duplicate 1.	0.502
LOC107087055	LOC107102500	ENSCVAP00000025054	ENSCVAP00000008024	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.542
LOC107087055	LOC107104443	ENSCVAP00000025054	ENSCVAP00000007657	Uncharacterized protein.	Intersectin 2b.	0.833
LOC107092037	ENSCVAP00000031602	ENSCVAP00000010346	ENSCVAP00000031602	Uncharacterized protein.	Uncharacterized protein.	0.833
LOC107092037	LOC107099242	ENSCVAP00000010346	ENSCVAP00000031949	Uncharacterized protein.	F11 receptor, tandem duplicate 1.	0.502
LOC107092037	LOC107102500	ENSCVAP00000010346	ENSCVAP00000008024	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.542
LOC107092037	LOC107104443	ENSCVAP00000010346	ENSCVAP00000007657	Uncharacterized protein.	Intersectin 2b.	0.833
LOC107098535	ENSCVAP00000031602	ENSCVAP00000020751	ENSCVAP00000031602	Ras homolog family member Ca.	Uncharacterized protein.	0.833
LOC107098535	LOC107099242	ENSCVAP00000020751	ENSCVAP00000031949	Ras homolog family member Ca.	F11 receptor, tandem duplicate 1.	0.502
LOC107098535	LOC107102500	ENSCVAP00000020751	ENSCVAP00000008024	Ras homolog family member Ca.	ANK_REP_REGION domain-containing protein.	0.542