STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107087046UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3. (496 aa)    
Predicted Functional Partners:
Fut8
Uncharacterized protein.
     
 0.919
st6gal2
ST6 beta-galactosamide alpha-2,6-sialyltranferase 2a; Belongs to the glycosyltransferase 29 family.
     
 0.919
LOC107090303
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.919
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.
     
 0.917
b3gnt5
Hexosyltransferase.
   
 
 0.915
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
   
 0.915
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
     
 0.914
LOC107086615
Hexosyltransferase.
   
 
 0.912
B3GALT1
Hexosyltransferase.
   
 
 0.912
B3GNT10
Hexosyltransferase.
   
 
 0.911
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.