STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egfl7EGF-like-domain, multiple 7. (304 aa)    
Predicted Functional Partners:
LOC107091504
GATA binding protein 2a.
   
 
 0.684
f13a1
Coagulation factor XIII, A1 polypeptide b.
    
 
 0.549
spred1
Sprouty related EVH1 domain containing 1.
    
 
 0.518
fkbpl
FKBP prolyl isomerase like.
    
 0.451
LOC107089874
Endothelial cell adhesion molecule a.
   
 
 0.432
egf
Epidermal growth factor.
    
 0.424
fbxw2
F-box and WD repeat domain containing 2.
    
 0.424
mmrn2
EMI domain-containing protein.
   
 0.418
LOC107086273
SET and MYND domain containing 1b.
    
 0.414
LOC107090570
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.413
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.