STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107101922Peptidylprolyl isomerase. (455 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
   
 0.920
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.886
LOC107095146
Prostaglandin E synthase 3a (cytosolic).
   
 0.886
LOC107100299
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.878
ENSCVAP00000015714
Uncharacterized protein.
   
 0.878
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.878
LOC107100300
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.878
NR3C1
Nuclear receptor subfamily 3 group C member 1.
    
 0.840
LOC107101948
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
    
 0.840
pgr
Progesterone receptor.
    
 0.825
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.