STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenppUncharacterized protein. (206 aa)    
Predicted Functional Partners:
cenpq
Uncharacterized protein.
   
 0.987
cenpi
Centromere protein I.
   
 0.980
cenpn
Centromere protein N.
   
 0.974
cenpk
Centromere protein K.
   
 0.972
cenpm
Proliferation associated nuclear element.
   
 0.963
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.960
LOC107097974
Uncharacterized protein.
   
 0.953
LOC107090480
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
 0.851
LOC107096398
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.851
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
 0.851
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.