Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107102488 | cops5 | ENSCVAP00000008161 | ENSCVAP00000014948 | Ubiquitin-like domain-containing protein. | COP9 signalosome subunit 5. | 0.963 |
LOC107102488 | cul1 | ENSCVAP00000008161 | ENSCVAP00000023745 | Ubiquitin-like domain-containing protein. | Cullin 1b; Belongs to the cullin family. | 0.974 |
LOC107102488 | cul2 | ENSCVAP00000008161 | ENSCVAP00000024146 | Ubiquitin-like domain-containing protein. | Cullin 2; Belongs to the cullin family. | 0.959 |
LOC107102488 | eloc | ENSCVAP00000008161 | ENSCVAP00000025309 | Ubiquitin-like domain-containing protein. | Elongin C paralog a; Belongs to the SKP1 family. | 0.929 |
LOC107102488 | gps1 | ENSCVAP00000008161 | ENSCVAP00000018935 | Ubiquitin-like domain-containing protein. | G protein pathway suppressor 1. | 0.935 |
LOC107102488 | mysm1 | ENSCVAP00000008161 | ENSCVAP00000013330 | Ubiquitin-like domain-containing protein. | Myb-like, SWIRM and MPN domains 1. | 0.985 |
LOC107102488 | nae1 | ENSCVAP00000008161 | ENSCVAP00000012876 | Ubiquitin-like domain-containing protein. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.973 |
LOC107102488 | rbx1 | ENSCVAP00000008161 | ENSCVAP00000025530 | Ubiquitin-like domain-containing protein. | Ring-box 1, E3 ubiquitin protein ligase. | 0.972 |
LOC107102488 | senp8 | ENSCVAP00000008161 | ENSCVAP00000004215 | Ubiquitin-like domain-containing protein. | SUMO peptidase family member, NEDD8 specific. | 0.972 |
LOC107102488 | ubxn7 | ENSCVAP00000008161 | ENSCVAP00000003300 | Ubiquitin-like domain-containing protein. | UBX domain protein 7. | 0.980 |
cops5 | LOC107102488 | ENSCVAP00000014948 | ENSCVAP00000008161 | COP9 signalosome subunit 5. | Ubiquitin-like domain-containing protein. | 0.963 |
cops5 | cul1 | ENSCVAP00000014948 | ENSCVAP00000023745 | COP9 signalosome subunit 5. | Cullin 1b; Belongs to the cullin family. | 0.975 |
cops5 | cul2 | ENSCVAP00000014948 | ENSCVAP00000024146 | COP9 signalosome subunit 5. | Cullin 2; Belongs to the cullin family. | 0.958 |
cops5 | eloc | ENSCVAP00000014948 | ENSCVAP00000025309 | COP9 signalosome subunit 5. | Elongin C paralog a; Belongs to the SKP1 family. | 0.947 |
cops5 | gps1 | ENSCVAP00000014948 | ENSCVAP00000018935 | COP9 signalosome subunit 5. | G protein pathway suppressor 1. | 0.999 |
cops5 | mysm1 | ENSCVAP00000014948 | ENSCVAP00000013330 | COP9 signalosome subunit 5. | Myb-like, SWIRM and MPN domains 1. | 0.599 |
cops5 | nae1 | ENSCVAP00000014948 | ENSCVAP00000012876 | COP9 signalosome subunit 5. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.728 |
cops5 | rbx1 | ENSCVAP00000014948 | ENSCVAP00000025530 | COP9 signalosome subunit 5. | Ring-box 1, E3 ubiquitin protein ligase. | 0.972 |
cops5 | senp8 | ENSCVAP00000014948 | ENSCVAP00000004215 | COP9 signalosome subunit 5. | SUMO peptidase family member, NEDD8 specific. | 0.639 |
cops5 | ubxn7 | ENSCVAP00000014948 | ENSCVAP00000003300 | COP9 signalosome subunit 5. | UBX domain protein 7. | 0.962 |
page 1 of 5