STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000008380RGS domain-containing protein. (215 aa)    
Predicted Functional Partners:
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
    
 0.611
LOC107096879
Guanine nucleotide binding protein (G protein), beta 5a.
   
 0.582
LOC107099434
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.582
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.569
LOC107087481
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.562
LOC107097497
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.562
LOC107100829
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.538
LOC107099626
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.538
LOC107097117
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.538
LOC107097118
Uncharacterized protein.
    
 0.538
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.