STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl21Mitochondrial ribosomal protein L21. (194 aa)    
Predicted Functional Partners:
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.999
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.999
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.999
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.999
mrpl15
Mitochondrial ribosomal protein L15.
  
 
 0.999
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.999
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.999
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.