Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCVAP00000017040 | bsx | ENSCVAP00000017040 | ENSCVAP00000012041 | HMG box domain-containing protein. | Brain-specific homeobox. | 0.564 |
ENSCVAP00000017040 | lef1 | ENSCVAP00000017040 | ENSCVAP00000001276 | HMG box domain-containing protein. | Lymphoid enhancer-binding factor 1. | 0.594 |
ENSCVAP00000017040 | tcf7 | ENSCVAP00000017040 | ENSCVAP00000011274 | HMG box domain-containing protein. | Transcription factor 7. | 0.441 |
LOC107082304 | bsx | ENSCVAP00000031490 | ENSCVAP00000012041 | Transcription factor 7 like 1b. | Brain-specific homeobox. | 0.564 |
LOC107082304 | lef1 | ENSCVAP00000031490 | ENSCVAP00000001276 | Transcription factor 7 like 1b. | Lymphoid enhancer-binding factor 1. | 0.594 |
LOC107082304 | sall4 | ENSCVAP00000031490 | ENSCVAP00000008890 | Transcription factor 7 like 1b. | Spalt-like transcription factor 4. | 0.497 |
LOC107082304 | tcf7 | ENSCVAP00000031490 | ENSCVAP00000011274 | Transcription factor 7 like 1b. | Transcription factor 7. | 0.425 |
LOC107087726 | bsx | ENSCVAP00000004721 | ENSCVAP00000012041 | Spalt-like transcription factor 2. | Brain-specific homeobox. | 0.551 |
LOC107089920 | bsx | ENSCVAP00000007935 | ENSCVAP00000012041 | Spalt-like transcription factor 3a. | Brain-specific homeobox. | 0.551 |
LOC107089920 | sall4 | ENSCVAP00000007935 | ENSCVAP00000008890 | Spalt-like transcription factor 3a. | Spalt-like transcription factor 4. | 0.536 |
LOC107090828 | bsx | ENSCVAP00000014313 | ENSCVAP00000012041 | Spalt-like transcription factor 3b. | Brain-specific homeobox. | 0.551 |
bsx | ENSCVAP00000017040 | ENSCVAP00000012041 | ENSCVAP00000017040 | Brain-specific homeobox. | HMG box domain-containing protein. | 0.564 |
bsx | LOC107082304 | ENSCVAP00000012041 | ENSCVAP00000031490 | Brain-specific homeobox. | Transcription factor 7 like 1b. | 0.564 |
bsx | LOC107087726 | ENSCVAP00000012041 | ENSCVAP00000004721 | Brain-specific homeobox. | Spalt-like transcription factor 2. | 0.551 |
bsx | LOC107089920 | ENSCVAP00000012041 | ENSCVAP00000007935 | Brain-specific homeobox. | Spalt-like transcription factor 3a. | 0.551 |
bsx | LOC107090828 | ENSCVAP00000012041 | ENSCVAP00000014313 | Brain-specific homeobox. | Spalt-like transcription factor 3b. | 0.551 |
bsx | lef1 | ENSCVAP00000012041 | ENSCVAP00000001276 | Brain-specific homeobox. | Lymphoid enhancer-binding factor 1. | 0.564 |
bsx | sall2 | ENSCVAP00000012041 | ENSCVAP00000006011 | Brain-specific homeobox. | Si:ch211-212k18.5. | 0.551 |
bsx | sall4 | ENSCVAP00000012041 | ENSCVAP00000008890 | Brain-specific homeobox. | Spalt-like transcription factor 4. | 0.551 |
bsx | tcf7 | ENSCVAP00000012041 | ENSCVAP00000011274 | Brain-specific homeobox. | Transcription factor 7. | 0.564 |
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