STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107088101GLOBIN domain-containing protein; Belongs to the globin family. (177 aa)    
Predicted Functional Partners:
ENSCVAP00000010652
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.670
ngb
Neuroglobin; Belongs to the globin family.
      
 0.641
ENSCVAP00000024056
Uncharacterized protein.
   
 
 0.549
polr3h
Polymerase (RNA) III (DNA directed) polypeptide H.
      
 0.545
adm
Adrenomedullin a.
      
 0.493
LOC107101974
Single Ig and TIR domain containing.
      
 0.485
LOC107102974
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
0.478
gstk1
Glutathione S-transferase kappa.
      
 0.449
LOC107096550
Erythropoietin receptor.
   
  
 0.422
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.