STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000012554Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.821
akap1
A kinase (PRKA) anchor protein 1b.
   
 0.707
tdrd9
Tudor domain containing 9.
   
 0.687
LOC107098579
Uncharacterized protein.
      
 0.623
ENSCVAP00000011442
3'-5' exonuclease domain-containing protein.
   
  
 0.614
vps53
VPS53 subunit of GARP complex.
      
 0.609
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.603
fkbp6
Peptidylprolyl isomerase.
   
 
 0.603
pld6
PLD phosphodiesterase domain-containing protein.
   
  
 0.564
ENSCVAP00000003059
Tudor domain containing 12.
    
 0.555
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.