Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENDOV | LOC107086584 | ENSCVAP00000023663 | ENSCVAP00000002051 | Endonuclease V. | Cytochrome c oxidase assembly homolog 15 (yeast). | 0.525 |
ENDOV | LOC107104003 | ENSCVAP00000023663 | ENSCVAP00000018143 | Endonuclease V. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.590 |
ENDOV | alad | ENSCVAP00000023663 | ENSCVAP00000008332 | Endonuclease V. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.679 |
ENDOV | cpox | ENSCVAP00000023663 | ENSCVAP00000031316 | Endonuclease V. | Coproporphyrinogen oxidase. | 0.956 |
ENDOV | fech | ENSCVAP00000023663 | ENSCVAP00000013419 | Endonuclease V. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.891 |
ENDOV | ppox | ENSCVAP00000023663 | ENSCVAP00000013131 | Endonuclease V. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.928 |
ENDOV | uros | ENSCVAP00000023663 | ENSCVAP00000023437 | Endonuclease V. | Uroporphyrinogen III synthase. | 0.952 |
Itih2 | LOC107104003 | ENSCVAP00000017258 | ENSCVAP00000018143 | VIT domain-containing protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.767 |
Itih2 | fech | ENSCVAP00000017258 | ENSCVAP00000013419 | VIT domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.404 |
Itih2 | ppox | ENSCVAP00000017258 | ENSCVAP00000013131 | VIT domain-containing protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.667 |
LOC107086584 | ENDOV | ENSCVAP00000002051 | ENSCVAP00000023663 | Cytochrome c oxidase assembly homolog 15 (yeast). | Endonuclease V. | 0.525 |
LOC107086584 | alad | ENSCVAP00000002051 | ENSCVAP00000008332 | Cytochrome c oxidase assembly homolog 15 (yeast). | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.631 |
LOC107086584 | cpox | ENSCVAP00000002051 | ENSCVAP00000031316 | Cytochrome c oxidase assembly homolog 15 (yeast). | Coproporphyrinogen oxidase. | 0.699 |
LOC107086584 | fech | ENSCVAP00000002051 | ENSCVAP00000013419 | Cytochrome c oxidase assembly homolog 15 (yeast). | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.706 |
LOC107086584 | ppox | ENSCVAP00000002051 | ENSCVAP00000013131 | Cytochrome c oxidase assembly homolog 15 (yeast). | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.713 |
LOC107086584 | urod | ENSCVAP00000002051 | ENSCVAP00000005108 | Cytochrome c oxidase assembly homolog 15 (yeast). | Uroporphyrinogen decarboxylase. | 0.525 |
LOC107086584 | uros | ENSCVAP00000002051 | ENSCVAP00000023437 | Cytochrome c oxidase assembly homolog 15 (yeast). | Uroporphyrinogen III synthase. | 0.660 |
LOC107104003 | ENDOV | ENSCVAP00000018143 | ENSCVAP00000023663 | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | Endonuclease V. | 0.590 |
LOC107104003 | Itih2 | ENSCVAP00000018143 | ENSCVAP00000017258 | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | VIT domain-containing protein. | 0.767 |
LOC107104003 | alad | ENSCVAP00000018143 | ENSCVAP00000008332 | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.697 |
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