STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
commd1Copper metabolism (Murr1) domain containing 1. (191 aa)    
Predicted Functional Partners:
commd6
COMM domain containing 6.
   
 0.966
ccdc22
Coiled-coil domain containing 22.
    
 0.964
commd2
COMM domain containing 2.
    
 0.944
COMMD10
COMM domain containing 10.
   
 0.928
cul2
Cullin 2; Belongs to the cullin family.
    
 0.927
Commd4
COMM domain containing 4.
    
 0.917
LOC107090161
COMM domain containing 5.
    
 0.914
ENSCVAP00000009468
COMM domain containing 9.
    
 0.910
commd7
COMM domain containing 7.
    
 0.901
Ccdc93
KOG2701 domain-containing protein.
   
 
 0.880
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.