STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107093038Nardilysin a (N-arginine dibasic convertase); Belongs to the peptidase M16 family. (1086 aa)    
Predicted Functional Partners:
ins
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 0.757
ENSCVAP00000030679
IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 0.757
rps27a
Ribosomal protein S27a.
    
  0.755
ENSCVAP00000021667
Ubiquitin-like domain-containing protein.
    
  0.722
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.706
ENSCVAP00000002726
Ubiquitin-like domain-containing protein.
    
  0.667
iapp
CALCITONIN domain-containing protein.
    
 
 0.626
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.622
ENSCVAP00000022485
Sterol carrier protein 2b.
    
 0.622
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 
 0.608
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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