STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfip1ADP-ribosylation factor interacting protein 1 (arfaptin 1). (488 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.837
LOC107103513
Uncharacterized protein.
    
 0.774
LOC107103512
Uncharacterized protein.
    
 0.724
LOC107090869
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.538
ENSCVAP00000018217
Uncharacterized protein.
    
 0.538
arl15
ADP-ribosylation factor-like 15a.
    
 0.462
rac2
Uncharacterized protein.
   
 0.459
LOC107092536
Rac family small GTPase 1b.
   
 0.459
LOC107087645
Rac family small GTPase 3b.
   
 0.459
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.