STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (834 aa)    
Predicted Functional Partners:
tmf1
TATA element modulatory factor 1.
     
 0.547
zbtb33
Zinc finger and BTB domain containing 33.
  
 
  0.503
hepacam2
HEPACAM family member 2.
  
 
  0.445
frs2
Fibroblast growth factor receptor substrate 2b.
  
     0.445
golga4
Golgin A4.
     
 0.431
golga3
Golgin A3.
     
 0.429
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.422
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.417
ENSCVAP00000005869
Uncharacterized protein.
     
 0.415
gcc1
GRIP and coiled-coil domain containing 1.
     
 0.415
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.