STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APPL1Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. (211 aa)    
Predicted Functional Partners:
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
  
 
0.993
LOC107104443
Intersectin 2b.
   
 0.959
ENSCVAP00000031587
Uncharacterized protein.
   
 0.959
ENSCVAP00000031602
Uncharacterized protein.
   
 0.959
neo1
Neogenin 1b.
   
 0.956
Igdcc4
Uncharacterized protein.
   
  0.956
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
   
  0.956
LOC107087973
Uncharacterized protein.
   
  0.956
fndc1
Fibronectin type III domain containing 1.
    
  0.956
ENSCVAP00000028331
Uncharacterized protein.
   
  0.956
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.